Package io.github.WeronikaJargielo.protein_interaction_finder

Class AromaticAromaticInteraction

java.lang.Object

io.github.WeronikaJargielo.protein_interaction_finder.AromaticAromaticInteraction

public final class AromaticAromaticInteraction
extends java.lang.Object

Class representing aromatic-aromatic interaction.

Constructor Summary

Constructors

Constructor	Description
AromaticAromaticInteraction(AminoAcid firstAromaticRing, AminoAcid secondAromaticRing, double distanceBtwRings, double angleBtwRings)	Instantiates new aromatic-aromatic interaction.

Method Summary

Modifier and Type	Method	Description
boolean	equals(java.lang.Object o)
double	getAngleBtwRings()	Returns angle between aromatic rings' normal vectors.
double	getDistanceBtwRings()	Returns distance between aromatic rings' centroids.
AminoAcid	getFirstAromaticRing()	Returns aromatic amino acid of first interaction participant.
AminoAcid	getSecondAromaticRing()	Returns aromatic amino acid of second interaction participant.
int	hashCode()
java.lang.String	toString()

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

AromaticAromaticInteraction

public AromaticAromaticInteraction(AminoAcid firstAromaticRing,
                                   AminoAcid secondAromaticRing,
                                   double distanceBtwRings,
                                   double angleBtwRings)

Instantiates new aromatic-aromatic interaction. For parameters' full description see here.

Parameters:

firstAromaticRing - Aromatic amino acid of first interaction participant.

secondAromaticRing - Aromatic amino acid of second interaction participant.

distanceBtwRings - Distance between aromatic rings' centroids.

angleBtwRings - Angle between aromatic rings' normal vectors.

Method Detail

getFirstAromaticRing

public AminoAcid getFirstAromaticRing()

Returns aromatic amino acid of first interaction participant.

Returns:

Aromatic amino acid of first interaction participant.

getSecondAromaticRing

public AminoAcid getSecondAromaticRing()

Returns aromatic amino acid of second interaction participant.

Returns:

Aromatic amino acid of second interaction participant.

getDistanceBtwRings

public double getDistanceBtwRings()

Returns distance between aromatic rings' centroids.

Returns:

Distance between aromatic rings' centroids.

getAngleBtwRings

public double getAngleBtwRings()

Returns angle between aromatic rings' normal vectors.

Returns:

Angle between aromatic rings' normal vectors.

equals

public boolean equals(java.lang.Object o)

Overrides:

equals in class java.lang.Object

hashCode

public int hashCode()

Overrides:

hashCode in class java.lang.Object

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object