| AminoAcid |
Class representing single amino acid in protein.
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| AminoAromaticInteraction |
Class representing amino-aromatic interaction.
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| AminoAromaticInteractionCriteria |
Class representing criteria for identifying amino-aromatic interactions.
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| AromaticAromaticInteraction |
Class representing aromatic-aromatic interaction.
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| AromaticAromaticInteractionCriteria |
Class representing criteria for identifying aromatic-aromatic interactions.
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| AromaticRing |
Class representing single aromatic ring in protein.
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| DisulphideBridge |
Class representing disulphide bridge.
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| DisulphideBridgeCriteria |
Class representing criteria for identifying disulphide bridges.
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| HydrogenBond |
Class representing hydrogen bond.
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| HydrogenBondCriteria |
Class representing criteria for identifying hydrogen bonds.
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| HydrophobicInteraction |
Class representing hydrophobic interaction.
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| HydrophobicInteractionCriteria |
Class representing criteria for identifying hydrophobic interactions.
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| IonicInteraction |
Class representing ionic interaction.
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| IonicInteractionCriteria |
Class representing criteria for identifying ionic interactions.
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| PdbStructureParser |
Wrapper for BioJava Structure class.
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| ProteinInteractionFinder |
Class for identifying all implemented interactions.
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| SulphurAromaticInteraction |
Class representing sulphur-aromatic interaction.
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| SulphurAromaticInteractionCriteria |
Class representing criteria for identifying sulphur-aromatic interactions.
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