Package io.github.WeronikaJargielo.protein_interaction_finder

Class IonicInteraction

java.lang.Object

io.github.WeronikaJargielo.protein_interaction_finder.IonicInteraction

public class IonicInteraction
extends java.lang.Object

Class representing ionic interaction.

Constructor Summary

Constructors

Constructor	Description
IonicInteraction(AminoAcid anionicAminoAcid, AminoAcid cationicAminoAcid, double distanceBtwCentroids)	Instantiates new ionic interaction.

Method Summary

Modifier and Type	Method	Description
boolean	equals(java.lang.Object o)
AminoAcid	getAnionicAminoAcid()	Returns negatively charged amino acid.
AminoAcid	getCationicAminoAcid()	Returns positively charged amino acid.
double	getDistanceBtwCentroids()	Returns distance between charged groups' centroids of interaction participants.
int	hashCode()
java.lang.String	toString()

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

IonicInteraction

public IonicInteraction(AminoAcid anionicAminoAcid,
                        AminoAcid cationicAminoAcid,
                        double distanceBtwCentroids)

Instantiates new ionic interaction.

Parameters:

anionicAminoAcid - Negatively charged amino acid of interaction participant.

cationicAminoAcid - Positively charged amino acid of interaction participant.

distanceBtwCentroids - Distance between charged groups' centroids of interaction participants. See here.

Method Detail

getAnionicAminoAcid

public AminoAcid getAnionicAminoAcid()

Returns negatively charged amino acid.

Returns:

Negatively charged amino acid.

getCationicAminoAcid

public AminoAcid getCationicAminoAcid()

Returns positively charged amino acid.

Returns:

Positively charged amino acid.

getDistanceBtwCentroids

public double getDistanceBtwCentroids()

Returns distance between charged groups' centroids of interaction participants.

Returns:

Distance between charged groups' centroids of interaction participants.

equals

public boolean equals(java.lang.Object o)

Overrides:

equals in class java.lang.Object

hashCode

public int hashCode()

Overrides:

hashCode in class java.lang.Object

toString

public java.lang.String toString()

Overrides:

toString in class java.lang.Object